Language

English

Publication Date

4-1-2025

Journal

Nature

DOI

10.1038/s41586-025-08790-w

PMID

40205214

PMCID

PMC11981939

PubMedCentral® Posted Date

4-9-2025

PubMedCentral® Full Text Version

Post-print

Abstract

Understanding the brain requires understanding neurons' functional responses to the circuit architecture shaping them. Here we introduce the MICrONS functional connectomics dataset with dense calcium imaging of around 75,000 neurons in primary visual cortex (VISp) and higher visual areas (VISrl, VISal and VISlm) in an awake mouse that is viewing natural and synthetic stimuli. These data are co-registered with an electron microscopy reconstruction containing more than 200,000 cells and 0.5 billion synapses. Proofreading of a subset of neurons yielded reconstructions that include complete dendritic trees as well the local and inter-areal axonal projections that map up to thousands of cell-to-cell connections per neuron. Released as an open-access resource, this dataset includes the tools for data retrieval and analysis

Keywords

Animals, Mice, Connectome, Visual Cortex, Synapses, Neurons, Male, Primary Visual Cortex, Calcium, Female, Dendrites, Mice, Inbred C57BL, Axons

Published Open-Access

yes

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