Language

English

Publication Date

9-8-2026

Journal

Nature Communications

DOI

10.1038/s41467-026-77191-y

PMID

42711331

PMCID

PMC13554239

PubMedCentral® Posted Date

9-8-2026

PubMedCentral® Full Text Version

Post-print

Abstract

A major gap in our understanding of animal development is how adult body plans arise in animals with indirect development, where adults emerge from the transformation of a distinct larval form during metamorphosis. We address this question by examining cellular changes in the enteropneust hemichordate Schizocardium californicum, a species with a complex lifecycle and dramatic metamorphosis. Employing whole-body single-cell RNA sequencing, we chart the cellular composition and transcriptional dynamics of larval, metamorphic, and adult stages. Our tissue-level atlas reveals that ectodermal and endodermal cell types in larvae and adults occupy distinct transcriptional spaces, showing greater similarity to other cell types within the same life stage than to their counterparts in the opposite stage. In contrast, mesodermal cell types from both larvae and adults cluster closely together, indicating conserved transcriptional profiles. These findings demonstrate that the extensive morphological reorganization during metamorphosis is accompanied by broad shifts in transcriptional identity and reveal life-history stage as a major organizing axis of cellular state during the larva-to-adult transition.

Keywords

Animals, Larva, Metamorphosis, Biological, Gene Expression Regulation, Developmental, Body Patterning, Chordata, Nonvertebrate, Ectoderm, Mesoderm, Single-Cell Analysis, Endoderm, Transcriptome, Evolutionary developmental biology, Gastrulation, Biological metamorphosis

Published Open-Access

yes

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