Language

English

Publication Date

4-9-2025

Journal

Cell Host & Microbe

DOI

10.1016/j.chom.2025.03.001

PMID

40139192

PMCID

PMC11985272

PubMedCentral® Posted Date

4-9-2026

PubMedCentral® Full Text Version

Author MSS

Abstract

Nucleotides are essential building blocks for major cellular macromolecules and are critical for life. Consequently, bacterial pathogens must acquire or synthesize nucleotides during infection. Clostridioides difficile is the most common hospital-acquired gastrointestinal infection, and nutrient acquisition is critical for pathogenesis. However, the impact of nucleotide metabolism on C. difficile infection remains unclear. Here, we discover that 4-thiouracil (4-TU), a pyrimidine analog present in the human gut, is toxic to commensal bacteria. 4-TU hijacks the uracil salvage pathway for incorporation into RNA through the uracil phosphoribosyltransferase activity encoded by PyrR and Upp. C. difficile can salvage 4-TU as a pyrimidine source through the enzymatic action of a thiouracil desulfurase (TudS), thereby contributing to C. difficile fitness in mice fed 4-TU or MiniBioreactor models of infection containing exogenous 4-TU. Collectively, these results reveal a molecular mechanism for C. difficile to utilize a poisonous pyrimidine analog in the vertebrate gut to outcompete commensal microbes.

Keywords

Clostridioides difficile, Thiouracil, Animals, Mice, Clostridium Infections, Humans, Pentosyltransferases, RNA, Bacterial, Bacterial Proteins, Gastrointestinal Tract, Clostridioides difficile, nucleotide, TudS, 4-thiouracil, PyrR, Upp, RNA, pyrimidine analog

Published Open-Access

yes

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