Open-access full-text journal articles from UT Medical School from 1999-present

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Submissions from 2007

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Relative contributions of Enterococcus faecalis OG1RF sortase-encoding genes, srtA and bps (srtC), to biofilm formation and a murine model of urinary tract infection., Kelvin D Kemp, Kavindra V Singh, Sreedhar R Nallapareddy, and Barbara E Murray

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Relative contributions of Enterococcus faecalis OG1RF sortase-encoding genes, srtA and bps (srtC), to biofilm formation and a murine model of urinary tract infection., Kelvin D Kemp, Kavindra V Singh, Sreedhar R Nallapareddy, and Barbara E Murray

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Neurogranin controls the spatiotemporal pattern of postsynaptic Ca2+/CaM signaling., Yoshihisa Kubota, John A Putkey, and M Neal Waxham

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The relationship between the field-shifting phenomenon and representational coherence of place cells in CA1 and CA3 in a cue-altered environment., Inah Lee and James J Knierim

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Severe aortic and arterial aneurysms associated with a TGFBR2 mutation., Scott A LeMaire, Hariyadarshi Pannu, Van Tran-Fadulu, Stacey A Carter, Joseph S Coselli, and Dianna M Milewicz

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Expression of the neural stem cell markers NG2 and L1 in human angiomyolipoma: are angiomyolipomas neoplasms of stem cells?, So Dug Lim, William Stallcup, Benjamin Lefkove, Baskaran Govindarajan, Kit Sing Au, Hope Northrup, Deborah Lang, David E Fisher, Avani Patel, Mahul B Amin, and Jack L Arbiser

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Neural reprogramming in retinal degeneration., Robert E Marc, Bryan W Jones, James R Anderson, Krista Kinard, David W Marshak, John H Wilson, Theodore Wensel, and Robert J Lucas

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Association of putative enteroaggregative Escherichia coli virulence genes and biofilm production in isolates from travelers to developing countries., Jamal A Mohamed, David B Huang, Zhi-Dong Jiang, Herbert L DuPont, James P Nataro, Jaime Belkind-Gerson, and Pablo C Okhuysen

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Inhibition of Enterococcus faecium adherence to collagen by antibodies against high-affinity binding subdomains of Acm., Sreedhar R Nallapareddy, Jouko Sillanpää, Vannakambadi K Ganesh, Magnus Höök, and Barbara E Murray

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Functional taxonomy of bacterial hyperstructures., Vic Norris, Tanneke den Blaauwen, Armelle Cabin-Flaman, Roy H Doi, Rasika Harshey, Laurent Janniere, Alfonso Jimenez-Sanchez, Ding Jun Jin, Petra Anne Levin, Eugenia Mileykovskaya, Abraham Minsky, Milton Saier, and Kirsten Skarstad

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Screening of gap junction antagonists on dye coupling in the rabbit retina., Feng Pan, Stephen L Mills, and Stephen C Massey

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Traumatic brain injury stimulates hippocampal catechol-O-methyl transferase expression in microglia., John B Redell and Pramod K Dash

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Different dark conformations function in color-sensitive photosignaling by the sensory rhodopsin I-HtrI complex., Jun Sasaki, Brian J Phillips, Xinpu Chen, Ned Van Eps, Ah-Lim Tsai, Wayne L Hubbell, and John L Spudich

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Dietary factors in the modulation of inflammatory bowel disease activity., Shinil Shah

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All in the family: atypical Hsp70 chaperones are conserved modulators of Hsp70 activity., Lance Shaner and Kevin A Morano

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The C-terminal domain of MinC inhibits assembly of the Z ring in Escherichia coli., Daisuke Shiomi and William Margolin

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Importance of the ebp (endocarditis- and biofilm-associated pilus) locus in the pathogenesis of Enterococcus faecalis ascending urinary tract infection., Kavindra V Singh, Sreedhar R Nallapareddy, and Barbara E Murray

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A model of late long-term potentiation simulates aspects of memory maintenance., Paul Smolen

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Dynamics of a minimal model of interlocked positive and negative feedback loops of transcriptional regulation by cAMP-response element binding proteins., Hao Song, Paul Smolen, Evyatar Av-Ron, Douglas A Baxter, and John H Byrne

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Dynamics of a minimal model of interlocked positive and negative feedback loops of transcriptional regulation by cAMP-response element binding proteins., Hao Song, Paul Smolen, Evyatar Av-Ron, Douglas A. Baxter, and John H. Byrne

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Does time really slow down during a frightening event?, Chess Stetson, Matthew P Fiesta, and David M Eagleman

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Illusory predictors: Generalizability of findings in cocaine treatment retention research., Angela L Stotts, Marc E Mooney, Shelly L Sayre, Meredith Novy, Joy M Schmitz, and John Grabowski

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Acquisition of a natural resistance gene renders a clinical strain of methicillin-resistant Staphylococcus aureus resistant to the synthetic antibiotic linezolid., Seok-Ming Toh, Liqun Xiong, Cesar A Arias, Maria V Villegas, Karen Lolans, John Quinn, and Alexander S Mankin

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Vancomycin-resistant Enterococcus faecalis endocarditis: linezolid failure and strain characterization of virulence factors., Constantine Tsigrelis, Kavindra V Singh, Thais D Coutinho, Barbara E Murray, and Larry M Baddour

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Crystal structure of the Anabaena sensory rhodopsin transducer., Lutz Vogeley, Vishwa D Trivedi, Oleg A Sineshchekov, Elena N Spudich, John L Spudich, and Hartmut Luecke

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Radiation injury is a potentially serious complication to fluoroscopically-guided complex interventions., Lk Wagner

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A pure population of lung alveolar epithelial type II cells derived from human embryonic stem cells., Dachun Wang, David L Haviland, Alan R Burns, Eva Zsigmond, and Rick A Wetsel

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Western diet, but not high fat diet, causes derangements of fatty acid metabolism and contractile dysfunction in the heart of Wistar rats., Christopher R Wilson, Mai K Tran, Katrina L Salazar, Martin E Young, and Heinrich Taegtmeyer

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Ambulatory care adverse events and preventable adverse events leading to a hospital admission., Donna M Woods, Eric J Thomas, Jane L Holl, Kevin B Weiss, and Troyen A Brennan

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Chronic administration of methylphenidate produces neurophysiological and behavioral sensitization., Pamela B Yang, Alan C Swann, and Nachum Dafny

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Aldosterone-induced Sgk1 relieves Dot1a-Af9-mediated transcriptional repression of epithelial Na+ channel alpha., Wenzheng Zhang, Xuefeng Xia, Mary Rose Reisenauer, Timo Rieg, Florian Lang, Dietmar Kuhl, Volker Vallon, and Bruce C Kone

Submissions from 2006

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Time to renal disease and end-stage renal disease in PROFILE: a multiethnic lupus cohort., Graciela S. Alarcón, Gerald McGwin, Michelle Petri, Rosalind Ramsey-Goldman, Barri J. Fessler, Luis M. Vilá, Jeffrey C. Edberg, John D. Reveille, and Robert P. Kimberly

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Insights into transcription enhancer factor 1 (TEF-1) activity from the solution structure of the TEA domain., Asokan Anbanandam, Diana C Albarado, Catherine T Nguyen, Georg Halder, Xiaolian Gao, and Sudha Veeraraghavan

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Comparison of OG1RF and an isogenic fsrB deletion mutant by transcriptional analysis: the Fsr system of Enterococcus faecalis is more than the activator of gelatinase and serine protease., Agathe Bourgogne, Susan G Hilsenbeck, Gary M Dunny, and Barbara E Murray

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Transcriptional regulation of the Borrelia burgdorferi antigenically variable VlsE surface protein., Tomasz Bykowski, Kelly Babb, Kate von Lackum, Sean P Riley, Steven J Norris, and Brian Stevenson

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Evolution of sensory complexity recorded in a myxobacterial genome., B S Goldman, W C Nierman, D Kaiser, S C Slater, A S Durkin, J A Eisen, J Eisen, C M Ronning, W B Barbazuk, M Blanchard, C Field, C Halling, G Hinkle, O Iartchuk, H S Kim, C Mackenzie, R Madupu, N Miller, A Shvartsbeyn, S A Sullivan, M Vaudin, R Wiegand, and H B Kaplan

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Proteomic identification of in vivo substrates for matrix metalloproteinases 2 and 9 reveals a mechanism for resolution of inflammation., Kendra J Greenlee, David B Corry, David A Engler, Risë K Matsunami, Philippe Tessier, Richard G Cook, Zena Werb, and Farrah Kheradmand

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Functional analysis of the amine substrate specificity domain of pepper tyramine and serotonin N-hydroxycinnamoyltransferases., Sei Kang, Kiyoon Kang, Gap Chae Chung, Doil Choi, Atsushi Ishihara, Dong-Sun Lee, and Kyoungwhan Back

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Treatment evolution in high-risk congenital diaphragmatic hernia: ten years' experience with diaphragmatic agenesis., Kevin P Lally, Pamela A Lally, Krisa P Van Meurs, Desmond J Bohn, Carl F Davis, Bradley Rodgers, Jatinder Bhatia, and Golde Dudell

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Chronic exposure to MDMA (Ecstasy) elicits behavioral sensitization in rats but fails to induce cross-sensitization to other psychostimulants., Gunjan M Modi, Pamela B Yang, Alan C Swann, and Nachum Dafny

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Ligand-signaled upregulation of Enterococcus faecalis ace transcription, a mechanism for modulating host-E. faecalis interaction., Sreedhar R Nallapareddy and Barbara E Murray

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Construction of improved temperature-sensitive and mobilizable vectors and their use for constructing mutations in the adhesin-encoding acm gene of poorly transformable clinical Enterococcus faecium strains., Sreedhar R Nallapareddy, Kavindra V Singh, and Barbara E Murray

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Endocarditis and biofilm-associated pili of Enterococcus faecalis., Sreedhar R Nallapareddy, Kavindra V Singh, Jouko Sillanpää, Danielle A Garsin, Magnus Höök, Stanley L Erlandsen, and Barbara E Murray

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The dynamic proteome of Lyme disease Borrelia., Steven J Norris

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Hepatic and renal cytochrome p450 gene regulation during citrobacter rodentium infection in wild-type and toll-like receptor 4 mutant mice., Terrilyn A Richardson, Melanie Sherman, Leposava Antonovic, Sean S Kardar, Henry W Strobel, Daniel Kalman, and Edward T Morgan

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Reversal of myocyte hypertrophy by ventricular unloading: cardiac improvement without adrenergic receptor up-regulation and relocalization., Pippa M Schnee, Naeema Shah, Marianne Bergheim, Brian J Poindexter, L Max Buja, Timothy J Myers, Branislav Radovancevic, O Howard Frazier, and Roger J Bick

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Characterization of Hsp70 binding and nucleotide exchange by the yeast Hsp110 chaperone Sse1., Lance Shaner, Rui Sousa, and Kevin A Morano

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Role of the cytoplasmic domain in Anabaena sensory rhodopsin photocycling: vectoriality of Schiff base deprotonation., Oleg A Sineshchekov, Elena N Spudich, Vishwa D Trivedi, and John L Spudich

A model of the roles of essential kinases in the induction and expression of late long-term potentiation., Paul Smolen, Douglas A. Baxter, and John H. Byrne

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Bifurcation and singularity analysis of a molecular network for the induction of long-term memory., Hao Song, Paul Smolen, Evyatar Av-Ron, Douglas A. Baxter, and John H H. Byrne

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Three strategically placed hydrogen-bonding residues convert a proton pump into a sensory receptor., Yuki Sudo and John L Spudich

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Role of A2B adenosine receptor signaling in adenosine-dependent pulmonary inflammation and injury., Chun-Xiao Sun, Hongyan Zhong, Amir Mohsenin, Eva Morschl, Janci L Chunn, Jose G Molina, Luiz Belardinelli, Dewan Zeng, and Michael R Blackburn

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Translational regulation of nuclear gene COX4 expression by mitochondrial content of phosphatidylglycerol and cardiolipin in Saccharomyces cerevisiae., Xuefeng Su and William Dowhan

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Minimizing radiation injury and neoplastic effects during pediatric fluoroscopy: what should we know?, Louis Kenneth Wagner

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Mutations affecting beta-tubulin folding and degradation., Yaqing Wang, Guoling Tian, Nicholas J Cowan, and Fernando Cabral

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Acute and chronic methylphenidate dose-response assessment on three adolescent male rat strains., Pamela B Yang, Alan C Swann, and Nachum Dafny

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Dose-response characteristics of methylphenidate on locomotor behavior and on sensory evoked potentials recorded from the VTA, NAc, and PFC in freely behaving rats., Pamela B Yang, Alan C Swann, and Nachum Dafny

Submissions from 2005

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Genetic networks controlling retinal injury., Felix R Vazquez-Chona, Amna N Khan, Chun K Chan, Anthony N Moore, Pramod K Dash, M Rosario Hernandez, Lu Lu, Elissa J Chesler, Kenneth F Manly, Robert W Williams, and Eldon E Geisert

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CART: an Hrs/actinin-4/BERP/myosin V protein complex required for efficient receptor recycling., Qing Yan, Wei Sun, Pekka Kujala, Yasmin Lotfi, Thomas A Vida, and Andrew J Bean

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Stratification of alpha ganglion cells and ON/OFF directionally selective ganglion cells in the rabbit retina., Jian Zhang, Wei Li, Hideo Hoshi, Stephen L Mills, and Stephen C Massey

Submissions from 2004

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Extending in vitro conditioning in Aplysia to analyze operant and classical processes in the same preparation., Björn Brembs, Douglas A. Baxter, and John H. Byrne

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Excess stroke in Mexican Americans compared with non-Hispanic Whites: the Brain Attack Surveillance in Corpus Christi Project., Lewis B Morgenstern, Melinda A Smith, Lynda D Lisabeth, Jan M H Risser, Ken Uchino, Nelda Garcia, Paxton J Longwell, David A McFarling, Olubumi Akuwumi, Areej Al-Wabil, Fahmi Al-Senani, Devin L Brown, and Lemuel A Moyé

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Simulation of Drosophila circadian oscillations, mutations, and light responses by a model with VRI, PDP-1, and CLK., Paul Smolen, Paul E. Hardin, Brian S. Lo, Douglas A. Baxter, and John H. Byrne

Submissions from 2003

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In vitro analog of classical conditioning of feeding behavior in aplysia., Riccardo Mozzachiodi, Hilde A. Lechner, Douglas A. Baxter, and John H. Byrne

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Quantitation of contacts among sensory, motor, and serotonergic neurons in the pedal ganglion of aplysia., Han Zhang, Marcy Wainwright, John H. Byrne, and Leonard J. Cleary

Submissions from 2002

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A reduced model clarifies the role of feedback loops and time delays in the Drosophila circadian oscillator., Paul Smolen, Douglas A. Baxter, and John H. Byrne

Submissions from 2000

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Long-term regulation of neuronal high-affinity glutamate and glutamine uptake in Aplysia., J Levenson, S Endo, L S. Kategaya, R I. Fernandez, D G. Brabham, J Chin, J H. Byrne, and A Eskin

Submissions from 1999

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TGF-beta1 in Aplysia: role in long-term changes in the excitability of sensory neurons and distribution of TbetaR-II-like immunoreactivity., J Chin, A Angers, L J. Cleary, A Eskin, and J H. Byrne