Open-access journal articles from UTHealth GSBS faculty and students.
Submissions from 2021
Med-BERT: pretrained contextualized embeddings on large-scale structured electronic health records for disease prediction., Laila Rasmy, Yang Xiang, Ziqian Xie, Cui Tao, and Degui Zhi
Submissions from 2020
Representation of EHR data for predictive modeling: a comparison between UMLS and other terminologies., Laila Rasmy, Firat Tiryaki, Yujia Zhou, Yang Xiang, Cui Tao, Hua Xu, and Degui Zhi
Vasopressor treatment and mortality following nontraumatic subarachnoid hemorrhage: a nationwide electronic health record analysis., George Williams, Vahed Maroufy, Laila Rasmy, Derek Brown, Duo Yu, Hai Zhu, Yashar Talebi, Xueying Wang, Emy Thomas, Gen Zhu, Ashraf Yaseen, Hongyu Miao, Luis Leon Novelo, Degui Zhi, Stacia M DeSantis, Hongjian Zhu, Jose-Miguel Yamal, David Aguilar, and Hulin Wu
Submissions from 2010
S9511: a Southwest Oncology Group phase II study of trimetrexate, 5-fluorouracil, and leucovorin in unresectable or metastatic adenocarcinoma of the stomach., Charles D Blanke, Kari Chansky, Kathy L Christman, Scott A Hundahl, Brian F Issell, Peter J Van Veldhuizen, G Thomas Budd, James L Abbruzzese, and John S Macdonald
FoxM1B regulates NEDD4-1 expression, leading to cellular transformation and full malignant phenotype in immortalized human astrocytes., Bingbing Dai, Russell O Pieper, Dawei Li, Ping Wei, Mingguang Liu, Shiao Y Woo, Kenneth D Aldape, Raymond Sawaya, Keping Xie, and Suyun Huang
Evolutionary conservation of residues in vertebrate DNA polymerase N conferring low fidelity and bypass activity., Kei-ichi Takata, Mercedes E Arana, Mineaki Seki, Thomas A Kunkel, and Richard D Wood
Loss of DNA polymerase zeta enhances spontaneous tumorigenesis., John P Wittschieben, Vaishali Patil, Veronika Glushets, Lisa J Robinson, Donna F Kusewitt, and Richard D Wood
Polymorphisms of the DNA repair gene MGMT and risk and progression of head and neck cancer., Zhengdong Zhang, Luo Wang, Sheng Wei, Zhensheng Liu, Li-E Wang, Erich M Sturgis, and Qingyi Wei
Submissions from 2009
CA125/MUC16 is dispensable for mouse development and reproduction., Dong-Joo Cheon, Ying Wang, Jian Min Deng, Zhen Lu, Lianchun Xiao, Chun-Ming Chen, Robert C Bast, and Richard R Behringer
CREB mediates prostaglandin F2alpha-induced MUC5AC overexpression., Wen-Cheng Chung, Seung-Hee Ryu, Hongxia Sun, Darryl C Zeldin, and Ja Seok Koo
Dicer is required for female reproductive tract development and fertility in the mouse., Gabriel Gonzalez and Richard R Behringer
Long-term survival after multidisciplinary management of resected pancreatic adenocarcinoma., Matthew H G Katz, Huamin Wang, Jason B Fleming, Charlotte C Sun, Rosa F Hwang, Robert A Wolff, Gauri Varadhachary, James L Abbruzzese, Christopher H Crane, Sunil Krishnan, Jean-Nicolas Vauthey, Eddie K Abdalla, Jeffrey E Lee, Peter W T Pisters, and Douglas B Evans
KEAP1 E3 ligase-mediated downregulation of NF-kappaB signaling by targeting IKKbeta., Dung-Fang Lee, Hsu-Ping Kuo, Mo Liu, Chao-Kai Chou, Weiya Xia, Yi Du, Jia Shen, Chun-Te Chen, Longfei Huo, Ming-Chuan Hsu, Chia-Wei Li, Qingqing Ding, Tsai-Lien Liao, Chien-Chen Lai, Ann-Chi Lin, Ya-Hui Chang, Shih-Feng Tsai, Long-Yuan Li, and Mien-Chie Hung
Therapeutic Targeting of ATP7B in Ovarian Carcinoma., Lingegowda S Mangala, Vesna Zuzel, Rosemarie Schmandt, Erik S Leshane, Jyotsna B Halder, Guillermo N Armaiz-Pena, Whitney A Spannuth, Takemi Tanaka, Mian M K Shahzad, Yvonne G Lin, Alpa M Nick, Christopher G Danes, Jeong-Won Lee, Nicholas B Jennings, Pablo E Vivas-Mejia, Judith K Wolf, Robert L Coleman, Zahid H Siddik, Gabriel Lopez-Berestein, Svetlana Lutsenko, and Anil K Sood
Antibodies targeting hepatoma-derived growth factor as a novel strategy in treating lung cancer., Hening Ren, Zuoming Chu, and Li Mao
Submissions from 2008
An Sp1/Sp3 binding polymorphism confers methylation protection., Yanis A. Boumber, Yutaka Kondo, Xuqi Chen, Lanlan Shen, Yi Guo, Carmen Tellez, Marcos R H Estécio, Saira Ahmed, and Jean-Pierre J. Issa
Killing of human melanoma cells induced by activation of class I interferon-regulated signaling pathways via MDA-7/IL-24., Suhendan Ekmekcioglu, John B Mumm, Malini Udtha, Sunil Chada, and Elizabeth A Grimm
Sp1 up-regulates cAMP-response-element-binding protein expression during retinoic acid-induced mucous differentiation of normal human bronchial epithelial cells., Jeong Soo Hong, Seung-Wook Kim, and Ja Seok Koo
Eomesodermin, a target gene of Pou4f2, is required for retinal ganglion cell and optic nerve development in the mouse., Chai-An Mao, Takae Kiyama, Ping Pan, Yasuhide Furuta, Anna-Katerina Hadjantonakis, and William H Klein
LY2109761, a novel transforming growth factor beta receptor type I and type II dual inhibitor, as a therapeutic approach to suppressing pancreatic cancer metastasis., Davide Melisi, Satoshi Ishiyama, Guido M Sclabas, Jason B Fleming, Qianghua Xia, Giampaolo Tortora, James L Abbruzzese, and Paul J Chiao
Genetic variation in genes for the xenobiotic-metabolizing enzymes CYP1A1, EPHX1, GSTM1, GSTT1, and GSTP1 and susceptibility to colorectal cancer in Lynch syndrome., Mala Pande, Christopher I Amos, Daniel R Osterwisch, Jinyun Chen, Patrick M Lynch, Russell Broaddus, and Marsha L Frazier
REST maintains self-renewal and pluripotency of embryonic stem cells., Sanjay K Singh, Mohamedi N Kagalwala, Jan Parker-Thornburg, Henry Adams, and Sadhan Majumder
FoxM1B transcriptionally regulates vascular endothelial growth factor expression and promotes the angiogenesis and growth of glioma cells., Yujian Zhang, Nu Zhang, Bingbing Dai, Mingguang Liu, Raymond Sawaya, Keping Xie, and Suyun Huang
Submissions from 2007
Phosphorylation of the proline-rich domain of Xp95 modulates Xp95 interaction with partner proteins., Robert E Dejournett, Ryuji Kobayashi, Shujuan Pan, Chuanfen Wu, Laurence D Etkin, Richard B Clark, Oliver Bögler, and Jian Kuang
Mutations in the cofilin partner Aip1/Wdr1 cause autoinflammatory disease and macrothrombocytopenia., Benjamin T Kile, Athanasia D Panopoulos, Roslynn A Stirzaker, Douglas F Hacking, Lubna H Tahtamouni, Tracy A Willson, Lisa A Mielke, Katya J Henley, Jian-Guo Zhang, Ian P Wicks, William S Stevenson, Paquita Nurden, Stephanie S Watowich, and Monica J Justice