Faculty, Staff and Student Publications
Language
English
Publication Date
1-16-2026
Journal
iScience
DOI
10.1016/j.isci.2025.114289
PMID
41536977
PMCID
PMC12796006
PubMedCentral® Posted Date
11-29-2025
PubMedCentral® Full Text Version
Post-print
Abstract
Acute myeloid leukemia (AML) is a clonal disorder characterized by immature blasts and arrested differentiation that primarily affects the bone marrow (BM) and occasionally presents as extramedullary (EM) disease. EM manifestations highlight AML's adaptability to distinct microenvironments, which we examined using spatial analyses of medullary and EM tissues. We describe a workflow for Visium-based spatial transcriptomics in medullary and EM AML, revealing insights into cell-cell communication and the spatial organization of AML hierarchies. In BM, monocytes and granulocyte-monocyte progenitors colocalized with leukemic populations, sharing molecular signatures with those in EM sample. CXCL12-CXCR4-mediated communication correlated with PI3K/AKT/mTOR signaling in inflammatory niches.
Keywords
Components of the immune system, Proteomics, Transcriptomics
Published Open-Access
yes
Recommended Citation
Dasdemir, Enes; Veletic, Ivo; Ly, Christopher P; et al., "Integrative Spatial Multi-omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in AML" (2026). Faculty, Staff and Student Publications. 5232.
https://digitalcommons.library.tmc.edu/uthgsbs_docs/5232
Included in
Bioinformatics Commons, Biomedical Informatics Commons, Genetic Phenomena Commons, Medical Genetics Commons, Oncology Commons