Faculty, Staff and Student Publications
Language
English
Publication Date
12-1-2024
Journal
Computational and Structural Biotechnology Journal
DOI
10.1016/j.csbj.2023.12.005
PMID
38173879
PMCID
PMC10762375
PubMedCentral® Posted Date
12-7-2023
PubMedCentral® Full Text Version
Post-print
Abstract
P2X receptors (P2X1-7) are non-selective cation channels involved in many physiological activities such as synaptic transmission, immunological modulation, and cardiovascular function. These receptors share a conserved mechanism to sense extracellular ATP. TNP-ATP is an ATP derivative acting as a nonselective competitive P2X antagonist. Understanding how it occupies the orthosteric site in the absence of agonism may help reveal the key allostery during P2X gating. However, TNP-ATP/P2X complexes (TNP-ATP/human P2X3 (hP2X3) and TNP-ATP/chicken P2X7 (ckP2X7)) with distinct conformations and different mechanisms of action have been proposed. Whether these represent species and subtype variations or experimental differences remains unclear. Here, we show that a common mechanism of TNP-ATP recognition exists for the P2X family members by combining enhanced conformation sampling, engineered disulfide bond analysis, and covalent occupancy. In this model, the polar triphosphate moiety of TNP-ATP interacts with the orthosteric site, while its TNP-moiety is deeply embedded in the head and dorsal fin (DF) interface, creating a restrictive allostery in these two domains that results in a partly enlarged yet ion-impermeable pore. Similar results were obtained from multiple P2X subtypes of different species, including ckP2X7, hP2X3, rat P2X2 (rP2X2), and human P2X1 (hP2X1). Thus, TNP-ATP uses a common mechanism for P2X recognition and modulation by restricting the movements of the head and DF domains which are essential for P2X activation. This knowledge is applicable to the development of new P2X inhibitors.
Keywords
TNP-ATP, P2X3 receptor, P2X7 receptor, Recognition mechanism
Published Open-Access
yes
Recommended Citation
Ma, Xiao-Bo; Yue, Chen-Xi; Liu, Yan; et al., "A Shared Mechanism for Tnp-ATP Recognition by Members of the P2X Receptor Family" (2024). Faculty, Staff and Student Publications. 1127.
https://digitalcommons.library.tmc.edu/uthmed_docs/1127