Faculty, Staff and Student Publications
Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.
Submissions from 2024
TMPRSS2 Is a Tumor Suppressor and Its Downregulation Promotes Antitumor Immunity and Immunotherapy Response in Lung Adenocarcinoma, Zhixian Liu, Qiqi Lu, Zhilan Zhang, et al.
FedGMMAT: Federated Generalized Linear Mixed Model Association Tests, Wentao Li, Han Chen, Xiaoqian Jiang, et al.
Optimizing Medication Querying Using Ontology-Driven Approach With Omop: With an Application to a Large-Scale COVID-19 EHR Dataset, Xiaojin Li, Yan Huang, Licong Cui, et al.
Relational Database-Based Resource-Provenance Visualization Engine: With an Application to BICAN Data, Xiaojin Li, Yan Huang, Lydia Ng, et al.
Assessing the Reproducibility of Research Based on the Food and Drug Administration Manufacturer and User Facility Device Experience Data, Xinyu Li, Yubo Feng, Yang Gong, et al.
Artificial Intelligence-Powered Pharmacovigilance: A Review of Machine and Deep Learning in Clinical Text-Based Adverse Drug Event Detection for Benchmark Datasets, Yiming Li, Wei Tao, Zehan Li, et al.
RefAI: A GPT-Powered Retrieval-Augmented Generative Tool for Biomedical Literature Recommendation and Summarization, Yiming Li, Jeff Zhao, Manqi Li, et al.
Developing Deep Learning-Based Strategies To Predict the Risk of Hepatocellular Carcinoma Among Patients With Nonalcoholic Fatty Liver Disease From Electronic Health Records, Zhao Li, Lan Lan, Yujia Zhou, et al.
Ensemble Pretrained Language Models to Extract Biomedical Knowledge From Literature, Zhao Li, Qiang Wei, Liang-Chin Huang, et al.
Safety, Immunogenicity, and Mechanism of A Rotavirus mRNA-LNP Vaccine In Mice, Chenxing Lu, Yan Li, Rong Chen, et al.
A Randomized Controlled Study of Auricular Point Acupressure to Manage Chemotherapy-Induced Neuropathy: Study Protocol, Nada Lukkahatai, Michael V Nguyen, Jingyu Zhang, et al.
Development and Validation of A Nomogram For Predicting Pulmonary Infection In Patients Receiving Immunosuppressive Drugs, Chuxuan Luo, Yue Zhang, Jiajie Zhang, et al.
Dynamic Hydrogel-Metal-Organic Framework System Promotes Bone Regeneration In Periodontitis Through Controlled Drug Delivery, Qipei Luo, Yuxin Yang, Chingchun Ho, et al.
StemDriver: A Knowledgebase of Gene Functions For Hematopoietic Stem Cell Fate Determination, Yangyang Luo, Jingjing Guo, Jianguo Wen, et al.
Inferring Tumor Purity Using Multi-omics Data Based on a Uniform Machine Learning Framework MoTP, Qiqi Lu, Zhixian Liu, and Xiaosheng Wang
Large Language Models Struggle in Token-Level Clinical Named Entity Recognition, Qiuhao Lu, Rui Li, Andrew Wen, et al.
Enhancing Clinical Relevance of Pretrained Language Models Through Integration of External Knowledge: Case Study on Cardiovascular Diagnosis From Electronic Health Records, Qiuhao Lu, Andrew Wen, Thien Nguyen, et al.
Survival Analysis of Clear Cell Renal Cell Carcinoma Based on Radiomics and Deep Learning Features From CT Images, Zhennan Lu, Sijia Wu, Dan Ni, et al.
Multiple Control of Azoquinoline Based Molecular Photoswitches, Youming Lv, Hebo Ye, and Lei You
An Improved Method for Diagnosis of Parkinson’s Disease Using Deep Learning Models Enhanced With Metaheuristic Algorithm, Babita Majhi, Aarti Kashyap, Siddhartha Suprasad Mohanty, et al.
Achieving Fairness Across Local and Global Models in Federated Learning, Disha Makhija, Xing Han, Joydeep Ghosh, et al.
Montelukast As A Repurposable Additive Drug For Standard-Efficacy Multiple Sclerosis Treatment: Emulating Clinical Trials With Retrospective Administrative Health Claims Data, Astrid M Manuel, Assaf Gottlieb, Leorah Freeman, et al.
Insights on the Future of Digital Health: An Analysis of Twitter Posts of IMIA Fellows, David T Marc, Karima Lalani, Susan H Fenton, et al.
Deep Learning to Predict Rapid Progression of Alzheimer's Disease From Pooled Clinical Trials: A Retrospective Study, Xiaotian Ma, Madison Shyer, Kristofer Harris, et al.
Generalizable Pipeline for Constructing HIV Risk Prediction Models Across Electronic Health Record Systems, Sarah B May, Thomas P Giordano, and Assaf Gottlieb