Faculty, Staff and Student Publications

 

Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.

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Submissions from 2022

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FusionAI, a DNA-Sequence-Based Deep Learning Protocol Reduces the False Positives of Human Fusion Gene Prediction, Xiaobo Zhou

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Phenotype-Genotype Analysis of Caucasian Patients With High Risk of Osteoarthritis, Xiaobo Zhou

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Prediction of Fluid Intelligence From T1-W MRI Images: A Precise Two-Step Deep Learning Framework, Xiaobo Zhou

Submissions from 2021

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A Comparison of Exhaustive and Non-lattice-based Methods for Auditing Hierarchical Relations in Gene Ontology

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Generalized and Transferable Patient Language Representation For Phenotyping With Limited Data

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Towards Digestible Digital Health Solutions: Application of a Health Literacy Inclusive Development Framework for Peripartum Depression Management

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Cross-Vendor CT Image Data Harmonization Using CVH-CT, Gary Yeeming Ge and Jin Chen

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The BMAL1/HIF2A Heterodimer Modulates Circadian Variations of Myocardial Injury, Hui Li, Xinwei Kuang, Long Liang, et al.

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Exchanges In A Virtual Environment For Diabetes Self-Management Education and Support: Social Network Analysis, Sahiti Myneni

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Digital Technology Needs In Maternal Mental Health: A Qualitative Inquiry, Sudhakar Selvaraj, Jerrie Refuerzo, and Sahiti Myneni

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Comprehensive Characterization of Covid-19 Patients With Repeatedly Positive Sars-Cov-2 Tests Using A Large US Electronic Health Record Database, Rebecca Stern, David M Aronoff, Hua Xu, et al.

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Identifying Sleep-Related Factors Associated with Cognitive Function in a Hispanics/Latinos Cohort: A Dual Random Forest Approach, Guo-Qiang Zhang

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Med-Bert: Pretrained Contextualized Embeddings On Large-Scale Structured Electronic Health Records For Disease Prediction, Degui Zhi

Submissions from 2020

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Digilego For Peripartum Depression: A Novel Patient-Facing Digital Health Instantiation

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Understanding Spatial Language In Radiology: Representation Framework, Annotation, and Spatial Relation Extraction From Chest X-Ray Reports Using Deep Learning, Dina Demner-Fushman and Kirk Roberts

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Covid-19 Testnorm: A Tool To Normalize Covid-19 Testing Names To Loinc Codes, Scott L DuVall, Elizabeth Hanchrow, Hongfang Liu, et al.

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Deep Learning In Clinical Natural Language Processing: A Methodical Review, Zongcheng Ji, Yuqi Si, Sarvesh Soni, et al.

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Representation of Ehr Data For Predictive Modeling: A Comparison Between Umls and Other Terminologies, Cui Tao, Hua Xu, and Degui Zhi

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Causal Discovery In Radiographic Markers of Knee Osteoarthritis and Prediction For Knee Osteoarthritis Severity With Attention-Long Short-Term Memory, Weiling Zhao, Yujia Zhou, Hua Xu, et al.

Submissions from 2019

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Deep Patient Representation of Clinical Notes Via Multi-Task Learning For Mortality Prediction

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Enhancing Clinical Concept Extraction With Contextual Embeddings

Submissions from 2018

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A Frame-Based Nlp System For Cancer-Related Information Extraction

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Effects of A Community Population Health Initiative On Blood Pressure Control In Latinos, Nora Silva and Tiffany Champagne-Langabeer

Submissions from 2011

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Comparison of Clinical Knowledge Management Capabilities of Commercially-Available and Leading Internally-Developed Electronic Health Records, R Scott Evans, W Paul Nichol, Joan S Ash, et al.

Submissions from 2010

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Sequential Incoherence In A Multi-Party Synchronous Computer Mediated Communication For An Introductory Health Informatics Course, Amy Franklin