Faculty, Staff and Student Publications
Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.
Submissions from 2025
DNA Double-Stranded Breaks, a Hallmark of Aging, Defined at the Nucleotide Resolution, Are Increased and Associated With Transcription in the Cardiac Myocytes in LMNA-Cardiomyopathy, Benjamin Cathcart, Sirisha M Cheedipudi, Leila Rouhi, et al.
Exploring Boundaries With Food, Substances, and People in Substance Use Recovery: A Qualitative Analysis, Tiffany Champagne-Langabeer, Audrey Sarah Cohen, Kriti Shrestha, et al.
Exploring Boundaries With Food, Substances, and People in Substance Use Recovery: A Qualitative Analysis, Tiffany Champagne-Langabeer, Audrey Sarah Cohen, Kriti Shrestha, et al.
Evaluating the Meditation Practices and Barriers to Adopting Mindful Medicine Among Physicians, Tiffany Champagne-Langabeer, Chelsea G Ratcliff, Christine Bakos-Block, et al.
Benchmarking Large Language Models for Biomedical Natural Language Processing Applications and Recommendations, Qingyu Chen, Yan Hu, Xueqing Peng, et al.
Classification of Schizophrenia, Bipolar Disorder and Major Depressive Disorder With Comorbid Traits and Deep Learning Algorithms, Xiangning Chen, Yimei Lu, Joan Manuel Cue, et al.
Cross-Institutional Dental Electronic Health Record Entity Extraction via Generative Artificial Intelligence and Synthetic Notes, Yao-Shun Chuang, Chun-Teh Lee, Guo-Hao Lin, et al.
Identification and Catalog of Viral Transcriptional Regulators in Human Diseases, Citu Citu, Le Chang, Astrid M Manuel, et al.
Biomedical Data Repositories Require Governance for Artificial Intelligence/Machine Learning Applications at Every Step, Ellen Wright Clayton, Susannah Rose, Camille Nebecker, et al.
Dietary and Consumer Behaviors in Individuals Currently Using Substances: A Cross-Sectional Study Based on NHANES (2013 - 2018), A Sarah Cohen, Marylou Cardenas-Turanzas, Audrey Lopez, et al.
miR147 Promotes Mucosal Integrity and Healing in Intestinal Inflammation, Agnieszka K Czopik, Arash Dabiri, Chia-Hao Tung, et al.
Genomic Editing of a Pathogenic Sequence Variant in ACTA2 Rescues Multisystemic Smooth Muscle Dysfunction Syndrome in Mice, Qianqian Ding, Peiheng Gan, Zhisheng Xu, et al.
Generalizable Self-Supervised Learning for Brain CTA in Acute Stroke, Yingjun Dong, Samiksha Pachade, Kirk Roberts, et al.
Optimized Genomic Editing of a Common Duchenne Muscular Dystrophy Mutation in Patient-Derived Muscle Cells and a New Humanized Mouse Model, Mateusz Z Durbacz, Yu Zhang, Hui Li, et al.
Genetic, Transcriptomic, and Epigenomic Insights into Sjögren's Disease: An Integrative Network Investigation and Immune Diseases Comparison, Nitesh Enduru, Astrid M Manuel, and Zhongming Zhao
Fructose and Glucose From Sugary Drinks Enhance Colorectal Cancer Metastasis via SORD, Tianshi Feng, Qin Luo, Yanlin Liu, et al.
An Examination of Ambulatory Care Code Specificity Utilization in Icd-10-cm Compared to Icd-9-cm: Implications for Icd-11 Implementation, Susan H Fenton, Cassandra Ciminello, Vickie M Mays, et al.
MMRT: MultiMut Recursive Tree for Predicting Functional Effects of High-Order Protein Variants From Low-Order Variants, Bryce Forrest, Houssemeddine Derbel, Zhongming Zhao, et al.
Enhanced and Interpretable Prediction of Multiple Cancer Types Using a Stacking Ensemble Approach with SHAP Analysis, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, and Zhongming Zhao
Ensemble Learning With Explainable AI for Improved Heart Disease Prediction Based on Multiple Datasets, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, and Zhongming Zhao
Lifestyle Data-Based Multiclass Obesity Prediction With Interpretable Ensemble Models Incorporating SHAP and LIME Analysis, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, and Zhongming Zhao
Pain Phenotyping Indicators in Older Adults with Chronic Low Back Pain: A Secondary Analysis of a Randomized Controlled Trial, Katrina R Hamilton, Nada Lukkahatai, Wanqi Chen, et al.
Designing a Narrative-Based Video Game for Adolescents Coping with a Parent's Cancer, Sophia Hamilton, Xubing Hao, Sharon Andrews, et al.
Dcpr: A Deep Learning Framework for Circadian Phase Reconstruction, Xiao Han, Xiaochen Cen, Zhijin Li, et al.
Leveraging SNOMED CT for Patient Cohort Identification Over Heterogeneous EHR Data, Xubing Hao, Yan Huang, Licong Cui, et al.