Faculty, Staff and Student Publications

 

Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.

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Submissions from 2025

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The Landscape of Malignant Transition: Unraveling Cancer Cell-of-Origin and Heterogeneous Tissue Microenvironment, Ruihan Luo, Jiajia Liu, Tiangang Wang, et al.

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Quantitative Profiling of Intratumor Immune Heterogeneity Identifies Loss of Immune Diversity as a Hallmark of Cancer Progression, Qiqi Lu, Jiangti Luo, Chia-Hao Tung, et al.

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Explainable Diagnosis Prediction through Neuro-Symbolic Integration, Qiuhao Lu, Rui Li, Elham Sagheb, et al.

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Transcriptome Size Matters for Single-Cell RNA-Seq Normalization and Bulk Deconvolution, Songjian Lu, Jiyuan Yang, Lei Yan, et al.

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Association of Glucagon-Like Peptide-1 Receptor Agonists With Cancer Risk in Older Adults With Type 2 Diabetes, Ying Lu, Hao Dai, Huilin Tang, et al.

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Automatic Summarization of Doctor-Patient Encounter Dialogues Using Large Language Model through Prompt Tuning, Mengxian Lyu, Cheng Peng, Xiaohan Li, et al.

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Simulated Emergency Room Sign-outs: What They Tell Us About Diagnostic Accuracy and Opportunities for Improvement, Roni Matin, Brent R King, Amit M Mehta, et al.

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A Pioneering Artificial Intelligence Tool To Predict Treatment Outcomes in Ovarian Cancer via Diagnostic Laparoscopy, Xiaotian Ma, Yu-Chun Hsu, Amma Asare, et al.

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Understanding Utilization and Prevention Measures Associated With a Caries Risk Assessment in Oral Health Transformation, Melody McGee, Ryan Brandon, Muhammad Walji, et al.

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Histone Methyltransferase ASH1L Primes Metastases and Metabolic Reprogramming of Macrophages in the Bone Niche, Chenling Meng, Kevin Lin, Wei Shi, et al.

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Dynamic Few-Shot Prompting for Clinical Note Section Classification Using Lightweight, Open-Source Large Language Models, Kurt Miller, Steven Bedrick, Qiuhao Lu, et al.

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Exploring the Inequitable Impact of Data Missingness on Fairness in Machine Learning, Sitao Min, Hafiz Asif, and Jaideep Vaidya

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Cafe: Improved Federated Data Imputation by Leveraging Missing Data Heterogeneity, Sitao Min, Hafiz Asif, Xinyue Wang, et al.

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It Is Time We Include Leadership Education and Experiences in MFM Training and Lifelong Learning, Cheryl A Moyer and Timothy R B Johnson

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Enhancing the Utility of Polygenic Scores in Alzheimer’s Disease Through Systematic Curation and Annotation, Savannah Mwesigwa, Yulin Dai, Nitesh Enduru, et al.

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Wnt-Directed CXCL12-Expressing Apical Papilla Progenitor Cells Drive Tooth Root Formation, Mizuki Nagata, Gaurav T Gadhvi, Taishi Komori, et al.

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A Hedgehog-Foxf Axis Coordinates Dental Follicle-Derived Alveolar Bone Formation, Mizuki Nagata, Gaurav T Gadhvi, Taishi Komori, et al.

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Privacy-Preserving Framework for Genomic Computations via Multi-key Homomorphic Encryption, Mina Namazi, Mohammadali Farahpoor, Erman Ayday, et al.

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Ethical Sourcing in the Context of Health Data Supply Chain Management: A Value Sensitive Design Approach, Camille Nebeker, Jean Christophe Bélisle-Pipon, Benjamin X Collins, et al.

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Ethical Sourcing in the Context of Health Data Supply Chain Management: A Value Sensitive Design Approach, Camille Nebeker, Jean Christophe Bélisle-Pipon, Benjamin X Collins, et al.

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Simultaneous Targeting of Tumor Cells and Tumor-Associated Macrophages To Reprogram Glioblastoma Using Trypsinized Extracellular Vesicles Carrying Tumor Suppressive MicroRNA, Grace H Nguyen, MinHye Noh, Jin Muk Kang, et al.

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Factors Associated With Medication Adherence Among Patients With Attention-Deficit/Hyperactivity Disorder (ADHD), Linh Nguyen, Yen-Chi L Le, Hannah Reygaerts, et al.

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Estrogen-Related Receptor Alpha Promotes Skeletal Muscle Regeneration and Mitigates Muscular Dystrophy, Thi Thu Hao Nguyen, Ya Xiang Huang, Svitlana Poliakova, et al.

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Video-Based Intervention To Reduce Treatment and Outcome Disparities in Adults Living With Stroke or Transient Ischemic Attack (Virtual): Protocol for a Randomized Controlled Trial, Munachi Okpala, Chigozirim Izeogu, Mengxi Wang, et al.

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Evaluating Generalizability of Oncology Trial Results to Real-World Patients Using Machine Learning-Based Trial Emulations, Xavier Orcutt, Kan Chen, Ronac Mamtani, et al.