Faculty, Staff and Student Publications
Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.
Submissions from 2025
Validation of a Risk Score for Cancer-Associated Thrombosis Using Nationwide EHR Data, Rock Bum Kim, Shengling Ma, Emily Zhou, et al.
KEDRec-LM: A Knowledge-distilled Explainable Drug Recommendation Large Language Model, Yejin Kim, Fabricio Murai, and Xiaozhong Liu
Inferred Developmental Origins of Brain Tumors From Single-Cell RNA-Sequencing Data, Hyun Yong Koh, Anders W Erickson, Claudia L Kleinman, et al.
Impact of Perioperative Organ Injury on Morbidity and Mortality in 28 Million Surgical Patients, Felix Kork, Yafen Liang, Adit A Ginde, et al.
Development and Validation of a Dynamic Real-Time Risk Prediction Model for Intensive Care Units Patients Based on Longitudinal Irregular Data: Multicenter Retrospective Study, Lan Lan, Xiaobo Zhou, Xiaoyan Yang, et al.
A Standard-Based Taxonomy of Features That Affect User Response to Clinical Decision Support Alerts, Thomas A Lasko and Adam Wright
Recombination Suppression Drives Expansion of the Drosophila Dot Chromosome, Annabelle Laughlin, Jaquelyn Hester, Darwin Garrido, et al.
Development and Characterization of CD44-Targeted X-Aptamers with Enhanced Binding Affinity for Cancer Therapeutics, Tae Jin Lee and David G Gorenstein
Identifying Developmental Intellectual Disability as a SUDEP Risk Marker from Epilepsy Monitoring Unit Reports Using Large Language Models, Samden D. Lhatoo, Guo-Qiang Zhang, and Licong Cui
Enhancing Fairness in Disease Prediction by Optimizing Multiple Domain Adversarial Networks, Bin Li, Xiaoqian Jiang, Kai Zhang, et al.
Lung Cancer Risk Prediction in Patients with Persistent Pulmonary Nodules Using the Brock Model and Sybil Model, Hui Li, Morteza Salehjahromi, Myrna C B Godoy, et al.
Comparison of in-Hospital Complication Rates After Transcatheter Aortic Valve Replacement in Patients With Bicuspid Versus Tricuspid Aortic Valves: A Retrospective Cohort Study, Kehan Li, Wei He, Xiaobo Zhou, et al.
Efficient Training Corpus Retrieval for Large Language Model Fine Tuning: A Case Study in Cancer, Rongbin Li, Omer Anjum, and W Jim Zheng
ASpdb: An Integrative Knowledgebase of Human Protein Isoforms From Experimental and AI-Predicted Structures, Rongbin Li, Wenbo Chen, Chiamaka S Diala, et al.
scProAtlas: An Atlas of Multiplexed Single-Cell Spatial Proteomics Imaging in Human Tissues, Xi Liu, Pora Kim, Liyu Huang, et al.
iGTP: Learning Interpretable Cellular Embedding for Inferring Biological Mechanisms Underlying Single-Cell Transcriptomics, Xiaoyang Li, Nuo Hu, Isha Kawosa, et al.
Suicide Phenotyping from Clinical Notes in Safety-Net Psychiatric Hospital Using Multi-Label Classification with Pre-Trained Language Models, Zehan Li, Yan Hu, Scott Lane, et al.
New Performance Measurement Framework for Realizing Patient-Centered Clinical Decision Support: Qualitative Development Study, Edwin Lomotan and Dean F Sittig
Introducing McOdegpt as a Zero-Shot Information Extraction From Clinical Free Text Data Tool for Cancer Research, Qi Long and Xiaoqian Jiang
Restoring Calibration for Aligned Large Language Models: A Calibration-Aware Fine-Tuning Approach, Qi Long, Weijie J Su, and Li Shen
Exploring Boundaries With Food, Substances, and People in Substance Use Recovery: A Qualitative Analysis, Audrey Lopez, Alisha Campbell, and Christine Bakos-Block
Exploring Boundaries With Food, Substances, and People in Substance Use Recovery: A Qualitative Analysis, Audrey Lopez, Alisha Campbell, and Christine Bakos-Block
Review of Diffusion Models and Its Applications in Biomedical Informatics, Jiawei Luo, Liren Yang, Yan Liu, et al.
The Landscape of Malignant Transition: Unraveling Cancer Cell-of-Origin and Heterogeneous Tissue Microenvironment, Ruihan Luo, Jiajia Liu, Tiangang Wang, et al.