Faculty, Staff and Student Publications
Open-access journal articles of faculty, students and staff from McWilliams School of Biomedical Informatics at UTHealth Houston. Some of the focus areas include Clinical and Cognitive Informatics, Biomedical Engineering, Public Health Informatics, and Translational Biomedical Informatics.
Submissions from 2025
HeteroRepur: Efficient Modeling of Heterogeneous Disease Graph for Depression Drug Repurposing Using Heterogeneous Graph Neural Networks, Ko-Hong Lin, Tongtong Huang, Kai Zhang, et al.
Dr Kinase: Predicting the Drug-Resistance Hotspots of Protein Kinases, Shaofeng Lin, Chao Tu, Ruifeng Hu, et al.
Investigating the Impact of Social Determinants of Health on Diagnostic Delays and Access to Antifibrotic Treatment in Idiopathic Pulmonary Fibrosis, Rui Li, Qiuhao Lu, Andrew Wen, et al.
Improving Diagnostic Accuracy in Preoperative Glioma Classification: Performance of Knowledge-Enhanced Large Language Models Compared With Radiologists, Shuang Li, Xin Fang, Yuqi Jin, et al.
Translation Suppresses Exogenous Target RNA-Mediated microRNA Decay, Tianqi Li, Lu Li, Nicholas M Hiers, et al.
Single-Nucleus Multiomics Reveals the Disrupted Regulatory Programs in Three Brain Regions of Sporadic Early-Onset Alzheimer’s Disease, Andi Liu, Citu Citu, Nitesh Enduru, et al.
AllergenAI: A Deep Learning Model Predicting Allergenicity Based on Protein Sequence, Jiajia Liu, Surendra S Negi, Chengyuan Yang, et al.
Novel Computational and Artificial Intelligence Models in Cancer Research, Li Liu, Fuhai Li, Xiaoming Liu, et al.
A Standard-Based Taxonomy of Features That Affect User Response to Clinical Decision Support Alerts, Siru Liu, Allison B McCoy, Dean F Sittig, et al.
Scupa: Single-Cell Unified Polarization Assessment of Immune Cells Using the Single-Cell Foundation Model, Wendao Liu and Zhongming Zhao
Medication Prescribing Checklists and Their Impact on Patient Safety: A Scoping Review, Yilei Liu, Tate W Miner, Kawtar Zouaidi, et al.
High-Risk Medications in Pediatric Dentistry: Patterns, Outcomes, and Clinical Implications, Yilei Liu, Kawtar Zouaidi, Colin C Hubbard, et al.
Privacy-Preserving Verification of ML Preprocessing via Model Behavior Indicators, Wenbiao Li, Anisa Halimi, Jaideep Vaidya, et al.
A Statistical Framework of Watermarks for Large Language Models: Pivot, Detection Efficiency and Optimal Rules, Xiang Li, Feng Ruan, Huiyuan Wang, et al.
Temporal Ensemble Logic for Integrative Representation of the Entirety of Clinical Trials, Xiaojin Li, Yan Huang, Rashmie Abeysinghe, et al.
GRPa-Prs: A Risk Stratification Method to Identify Genetically-Regulated Pathways in Polygenic Diseases, Xiaoyang Li, Brisa S Fernandes, Andi Liu, et al.
A Comparative Study of Recent Large Language Models on Generating Hospital Discharge Summaries for Lung Cancer Patients, Yiming Li, Fang Li, Na Hong, et al.
VaxBot-HPV: A GPT-Based Chatbot for Answering HPV Vaccine-Related Questions, Yiming Li, Jianfu Li, Manqi Li, et al.
Suicide Phenotyping from Clinical Notes in Safety-Net Psychiatric Hospital Using Multi-Label Classification with Pre-Trained Language Models, Zehan Li, Yan Hu, Scott Lane, et al.
Implementation of Screening and Assessment Tools for Diagnosing Opioid Use Disorder: A Systematic Review, Audrey Lopez, Audrey Sarah Cohen, Francine Vega, et al.
Baseline Predictors of Responders to Auricular Point Acupressure in Chronic Low Back Pain, Nada Lukkahatai, Wanqi Chen, Jennifer Kawi, et al.
Effects of Auricular Point Acupressure on Inflammatory Signaling in Chronic Low Back Pain: A Secondary Analysis of a Randomized Controlled Trial, Nada Lukkahatai, Hongyu Wang, Xinran Huang, et al.
gdGSE: An Algorithm to Evaluate Pathway Enrichment by Discretizing Gene Expression Values, Jiangti Luo, Qiqi Lu, Mengjiao He, et al.
EMR-LIP: A Lightweight Framework for Standardizing the Preprocessing of Longitudinal Irregular Data in Electronic Medical Records, Jiawei Luo, Shixin Huang, Lan Lan, et al.
Review of Diffusion Models and Its Applications in Biomedical Informatics, Jiawei Luo, Liren Yang, Yan Liu, et al.